dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0000313
Uniprot Accession O08658; NUP88_RAT;
Genbank Protein ID NP_446068.1;
Genbank Nucleotide ID NM_053616.1;
Protein Name Nuclear pore complex protein Nup88
Protein Synonyms/Alias 88 kDa nucleoporin;Nucleoporin Nup84;Nucleoporin Nup88;
Gene Name Nup88
Gene Synonyms/Alias Nup84;
Organism Rattus norvegicus(Rat)
NCBI Taxa ID 10116
Functional Description
(View all)		 Essential component of nuclear pore complex.
Phosphorylation Sites
 dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
49PATSTSPSCPPLPPHcurated23984901
170AERFFTSSTSLTLKHcurated23984901
518EDAGVAESPLRILAEPhosphoSitePlus;UniProt;curated22135298; 22673903; 23712012; 21630457; 23984901
699RKMEKVLSPQKPTITPhosphoSitePlus;UniProt;curated22135298; 22673903; 22276854
Sequence
(Fasta)		MAAAAGPVGD GELWQSWLPN HVVFLRLREG LKNQSPAEAD KPATSTSPSC PPLPPHLPTR 60
NLVFGLGGEL FLWDAEGSAF LVVRLRGPSG GSVEPPLSQY QRLLCINPPL FEIHQVLLSP 120
TQHHVALIGT KGLMALELPQ RWGKDSEFEG GKATVNCSTI PIAERFFTSS TSLTLKHAAW 180
YPSEMLDPHI VLLTSDNVIR IYSLREPQTP TKVIVLSEAE EESLILNKGR AYTASLGETA 240
VAFDFGPLVT VSKNMFEQKD REAVAYPLYI LYENGETFLT YVSLLHSPGN IGKLLGPLPM 300
HPAAEDNYGY DACAILCLPC VPNILVIATE SGMLYHCVVL EGEEDDDQTL EKSWDPRADL 360
IPSLYVFECV ELELALKLAS AEDDPFASDF SCPIKLHRDP KCPSRYHCSH EAGVHSVGLT 420
WIHKLHKFLG SDEEDKDSLQ ELTAEQKCFV EHILCTKPLP CRQPAPIRGF WIVPDILGPT 480
MICITSTYEC LIRPLLSTVH PASPPLLCTR EDAGVAESPL RILAEAPDSF EKHIKRILQR 540
SAANPALLKS SEKDLAPPPE ECLQLISRAT QVFREQYILK QDLAKEEIQR RVKLLCDQKR 600
KQLEDLNYCR EERKSLREMA ERLADKYEEA KEKQEDIMNR MKKVLHSFHT QLPVLSDSER 660
DMKKELQLIP DQLRHLGNAI KQVTMKKDYQ QRKMEKVLSP QKPTITLSAY QRKCIQSILK 720
EEGEHIREMV KQINDIRNHV NF 743
Keyword

KW-0007--Acetylation
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0811--Translocation
KW-0813--Transport
Interpro

IPR019321--Nucleoporin_Nup88
PROSITE
Pfam

PF10168--Nup88
Gene Ontology

GO:0005643--C:nuclear pore
GO:0005654--C:nucleoplasm
GO:0005215--F:transporter activity
GO:0007067--P:mitotic nuclear division
GO:0006406--P:mRNA export from nucleus
GO:0006611--P:protein export from nucleus
GO:0006606--P:protein import into nucleus
GO:0000055--P:ribosomal large subunit export from nucleus
GO:0000056--P:ribosomal small subunit export from nucleus