dbPAF Protein Information

Tag Content
dbPAF ID dbPAF-0000163
Uniprot Accession O01159; RSP7_CAEEL; P90797; Q8STE7;
Genbank Protein ID NP_741039.1; NP_741040.1;
Genbank Nucleotide ID NM_171033.4; NM_171034.4;
Protein Name Probable splicing factor, arginine/serine-rich 7
Protein Synonyms/Alias p54;
Gene Name rsp-7
Gene Synonyms/Alias D2089.1;
Organism Caenorhabditis elegans
NCBI Taxa ID 6239
Functional Description
(View all)
Phosphorylation Sites
 dbPAF PTMs: 4
PositionPeptidesSourceReferences ( PMIDs )
283RSPRRRRSPSPRRRRdbPTM 3.0;Phospho.ELM 9.0;PHOSIDA;curated19530675; 16381945; 23193290; 21081558; 18806794
285PRRRRSPSPRRRRDSdbPTM 3.0;Phospho.ELM 9.0;PHOSIDA;curated19530675; 16381945; 23193290; 21081558; 18806794
421KKAARKDSSDDEWEEdbPTM 3.0;Phospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 16381945; 23193290; 21081558; 19060867; 18806794
422KAARKDSSDDEWEEKdbPTM 3.0;Phospho.ELM 9.0;PHOSIDA;PhosphoPep 2.0;curated19530675; 16381945; 23193290; 21081558; 19060867; 18806794
Sequence
(Fasta)		MSGEEKEKVK ILHVANISTS ATRDHIYNMF NYLGKIQDLK VYPSEGNITA NTLLKTAFIK 60
FDDERCVEVA QHLTNTVVID CAIVCLPYPN PVIPDEESFF NSGGSTTAGQ RQLPPHVTNK 120
IQESDDGSAL LITVDPTLEQ LGLPAYPPLP ADTDSAKVEE IRRTVYVGNL PKGVDGNEVL 180
ELFNMYFGEV MYARMASGPD ALPCAYAYVE FSQQASVCNA LQNDGFEFKE RPLKIQHSRV 240
AIIKPQAKTD EQALGEIEEA IRMGRNGDDR DRRRSRSPRR RRSPSPRRRR DSRDRDRDRD 300
RDRRRSRDRR SRSRDRDRDR DRKRSRSRDR KRRSRSRDNK DRDRKRSRSR DRRRRSKSRD 360
RKRERSRSRS KDRKRDKKRS RSRSPEKRRD KEDRKTEKKE NENESSLREK LLEKKAARKD 420
SSDDEWEEKP TPTNGEVKNE EIGNGDVVMA SE 453
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0694--RNA-binding
Interpro

IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
PROSITE

PS50102--RRM
Pfam

PF00076--RRM_1
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0000166--F:nucleotide binding
GO:0044822--F:poly(A) RNA binding
GO:0006397--P:mRNA processing
GO:0000398--P:mRNA splicing, via spliceosome
GO:0008380--P:RNA splicing