dbPAF Protein Information


Tag Content
dbPAF ID dbPAF-0000086
Uniprot Accession O00422; SAP18_HUMAN; B2R494; Q2TTR4; Q6IAW9; Q8N606; Q9UF14;
Genbank Protein ID NP_005861.2;
Genbank Nucleotide ID NM_005870.4;
Protein Name Histone deacetylase complex subunit SAP18
Protein Synonyms/Alias 18 kDa Sin3-associated polypeptide;2HOR0202;Cell growth-inhibiting gene 38 protein;Sin3-associated polypeptide p18;
Gene Name SAP18
Gene Synonyms/Alias GIG38;
Organism Homo sapiens(Human)
NCBI Taxa ID 9606
Functional Description
(View all)
Component of the SIN3-repressing complex. Enhances the ability of SIN3-HDAC1-mediated transcriptional repression. When tethered to the promoter, it can direct the formation of a repressive complex to core histone proteins. Auxiliary component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Component of the ASAP and PSAP complexes which bind RNA in a sequence-independent manner and are proposed to be recruited to the EJC prior to or during the splicing process and to regulate specific excision of introns in specific transcription subsets. The ASAP complex can inhibit mRNA processing during in vitro splicing reactions. The ASAP complex promotes apoptosis and is disassembled after induction of apoptosis. Involved in the splicing modulation of BCL2L1/Bcl-X (and probably other apoptotic genes); specifically inhibits the formation of proapoptotic isoforms such as Bcl-X(S); the activity is different from the established EJC assembly and function.
Phosphorylation Sites
dbPAF PTMs: 12
PositionPeptidesSourceReferences ( PMIDs )
8MAVESRVTQEEIKKEPhosphoSitePlus;curated22135298; 25627689
25KPIDREKTCPLLLRVdbPTM 3.0;HPRD 9;PhosphoSitePlus;curated20068230; 16381945; 23193290; 18988627; 22135298; 22817900
35LLLRVFTTNNGRHHRdbPTM 3.0;HPRD 9;PhosphoSitePlus;curated20068230; 16381945; 23193290; 18988627; 22135298; 22817900
47HHRMDEFSRGNVPSSPhosphoSitePlus22135298
85PEARKKGTHFNFAIVdbPTM 3.0;HPRD 9;PhosphoSitePlus;curated18491316; 16381945; 23193290; 18988627; 22135298; 22817900
94FNFAIVFTDVKRPGYPhosphoSitePlus22135298
101TDVKRPGYRVKEIGSdbPTM 3.0;HPRD 9;PhosphoSitePlus;curated18491316; 16381945; 23193290; 18988627; 22135298; 22817900
108YRVKEIGSTMSGRKGPhosphoSitePlus;curated22135298; 22817900
116TMSGRKGTDDSMTLQPhosphoSitePlus22135298
119GRKGTDDSMTLQSQKPhosphoSitePlus;curated22135298; 25627689
121KGTDDSMTLQSQKFQPhosphoSitePlus22135298
132QKFQIGDYLDIAITPPHOSIDA;PhosphoSitePlus21081558; 22135298
Sequence
(Fasta)
MAVESRVTQE EIKKEPEKPI DREKTCPLLL RVFTTNNGRH HRMDEFSRGN VPSSELQIYT 60
WMDATLKELT SLVKEVYPEA RKKGTHFNFA IVFTDVKRPG YRVKEIGSTM SGRKGTDDSM 120
TLQSQKFQIG DYLDIAITPP NRAPPPSGRM RPY 154
Keyword

KW-0002--3D-structure
KW-0007--Acetylation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0832--Ubl conjugation

Interpro

IPR017250--Hist_deAcase_cplx_SAP18
IPR010516--SAP18

PROSITE
Pfam

PF06487--SAP18

Gene Ontology

GO:0061574--C:ASAP complex
GO:0005737--C:cytoplasm
GO:0000118--C:histone deacetylase complex
GO:0016607--C:nuclear speck
GO:0005654--C:nucleoplasm
GO:0044822--F:poly(A) RNA binding
GO:0003714--F:transcription corepressor activity
GO:0006325--P:chromatin organization
GO:0010467--P:gene expression
GO:0006397--P:mRNA processing
GO:0045814--P:negative regulation of gene expression, epigenetic
GO:0048025--P:negative regulation of mRNA splicing, via spliceosome
GO:1903507--P:negative regulation of nucleic acid-templated transcription
GO:0043065--P:positive regulation of apoptotic process
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
GO:0040029--P:regulation of gene expression, epigenetic
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0008380--P:RNA splicing
GO:0006351--P:transcription, DNA-templated